popari.model.Popari.superresolve

Popari.superresolve(differentiate_spatial_affinities=True, update_spatial_affinities=True, edge_subsample_rate=None, use_manual_gradients=True, n_epochs=10000, miniepochs=None, tol=1e-05)

Superresolve embeddings in hierarchical case.

Works in a cascading manner, by superresolving the embeddings from lowest to highest resolutions in order.

Parameters:

• differentiate_spatial_affinities (bool)

• update_spatial_affinities (bool)

• edge_subsample_rate (float | None)

• use_manual_gradients (bool)

• n_epochs (int)

• miniepochs (int | None)

• tol (float)